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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs61944633 chr12:132573740 A/G 2.85E-5 391 16.23 12.77 7.83 KM Plot
LGG rs62082472 chr18:10266177 C/T 0.000103 394 15.07 16.47 10.1 KM Plot
LGG rs62100755 chr18:33443573 C/T 8.9E-5 404 15.93 14.6 8.07 KM Plot
LGG rs62125642 chr2:17576829 C/T 6.9E-5 400 15.18 16.6 5.23 KM Plot
LGG rs62132087 chr2:17768015 C/T 0.000206 406 15.7 13.7 5.85 KM Plot
LGG rs62133590 chr2:17811126 G/A 6.55E-5 402 15.63 14.73 8.07 KM Plot
LGG rs62181661 chr2:220631381 G/A 6.43E-6 390 16.33 10.73 8.03 KM Plot
LGG rs62181662 chr2:220631385 C/T 6.43E-6 390 16.33 10.73 8.03 KM Plot
LGG rs62397578 chr6:33799485 C/T 2.48E-5 404 15.17 16.77 11.42 KM Plot
LGG rs62397592 chr6:33801388 T/C 9.68E-5 407 15.2 17.23 11.42 KM Plot
LGG rs62397593 chr6:33801698 T/C 8.64E-5 406 15.2 17.7 11.42 KM Plot
LGG rs62397594 chr6:33801886 C/A 8.64E-5 406 15.2 17.7 11.42 KM Plot
LGG rs62397597 chr6:33803937 C/T 4.13E-5 406 15.25 17.23 11.42 KM Plot
LGG rs62397598 chr6:33805323 G/A 2.78E-5 404 15.32 17.23 11.42 KM Plot
LGG rs62397602 chr6:33806870 C/T 2.71E-5 405 15.3 17.23 11.42 KM Plot